The bolts seem to be M10X96. The nuts that Chuck included with the kit are a bit non-standard tho. I think that he got them from some aircraft parts supply outfit, which strikes me as a good approach to get a high quality fastener when you have an idea to improve upon an OEM fastener. The nuts have a wide bottom, like your old HS girfriend, so no washer is needed and they are taller than normal. And since they are taller, they have more threads inside. That being the case, maybe the fact that the bolt didn’t get to the last two threads in the nut is no big deal.
Over the weekend I finished up the job. I know I keep saying that, but this time it’s true. I undid the rtab nuts, put locktite on them and then fastened them back up. Then I put a dab of marking goo on each nut and each eccentric. that ought to tell me if something turns.
Then I filled up the brake reservior and bled the rear brakes. Finally, I put the exhaust back on. Putting the exhaust back on turned out to be a trial because one of the studs in the manifolds (to the downtube) had damaged threads. After many many attempts to get a nut on the stud, I ended up removing the exhaust again and going at the stud with a die. Because there wasn’t much room and the awkward angle prevented me from seeing if I had the die square, it was tricky. But I used up some good luck and the die fixed the threads instead of ruining the stud.
What I need to do now is go drive around the block a couple times. If there’s something completely screwed up, best I find about it now than when I’m loading the trailer next week.